PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02521.1.p
Common NameLOC105955993, MIMGU_mgv11b007723mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 346aa    MW: 39271 Da    PI: 9.1642
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02521.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix55.51.5e-1754136286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       W+++e+la+i+a++e++ +l++g+lk+ +Weevs  + ++ g+   +++++qC++k+e+l+kry+ + +   +       +++yfd ++
  Migut.D02521.1.p  54 WSDEETLAIIKAYQEKWYSLKKGQLKAFQWEEVSVTVaARCGLdepSKTATQCRHKIEKLRKRYRSELQKPYS------YSWQYFDLMD 136
                       **********************************99964445544489*****************99887776......4699999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-1853138No hitNo description
PROSITE profilePS500906.37753114IPR017877Myb-like domain
SMARTSM005954.1E-761143IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAYSSPSTSP SPPPPPQQQH PPSRSHSCSP SLSPKHVPPH PPATESKKSP PVPWSDEETL  60
AIIKAYQEKW YSLKKGQLKA FQWEEVSVTV AARCGLDEPS KTATQCRHKI EKLRKRYRSE  120
LQKPYSYSWQ YFDLMDQMER GPIPVNARPI SAVKSFHGTA ALGYDSLYSN SAEYYNGGGE  180
SGNESEEKWN MGYNNSNDSV ELATRNKSKS INNIVRGEVK SWARTAKRMP IERGFSRSSN  240
RVTKVSRNPM NGKRKQRCYD GDDDVEEEHV PVEDEREESG GGGAMELAAE IRCFTEKFVG  300
MENKKIEMMS ETQRYRADIE KKRKEMILHA ERKIIDTIDR VFRAS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835260.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A022RGV40.0A0A022RGV4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124661516
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.11e-27Trihelix family protein